Skip to main content
Ctrl+K
wsidata 0.9.0.post4.dev0+f0353a8 documentation - Home wsidata 0.9.0.post4.dev0+f0353a8 documentation - Home
  • Installation
  • Introduction
  • API Reference
  • GitHub
  • Installation
  • Introduction
  • API Reference
  • GitHub

Section Navigation

  • wsidata.WSIData
  • wsidata.TileSpec
  • wsidata.SlideProperties
  • IO and Utilities Functions
    • wsidata.open_wsi
    • wsidata.agg_wsi
    • wsidata.concat_feature_anndata
    • wsidata.TileRequest
    • wsidata.shapes2tiles
  • Accessors
    • wsidata.FetchAccessor
    • wsidata.IterAccessor
    • wsidata.DatasetAccessor
    • wsidata.accessors.iter.TissueContour
    • wsidata.accessors.iter.TissueImage
    • wsidata.accessors.iter.TileImage
    • wsidata.register_wsidata_accessor
  • Torch Datasets
    • wsidata.dataset.TileImagesDataset
    • wsidata.dataset.TileFeatureDataset
    • wsidata.dataset.graph_data
  • WSI Readers
    • wsidata.reader.ReaderBase
    • wsidata.reader.OpenSlideReader
    • wsidata.reader.TiffSlideReader
    • wsidata.reader.FastSlideReader
    • wsidata.reader.BioFormatsReader
    • wsidata.reader.CuCIMReader
    • wsidata.reader.ISyntaxReader
    • wsidata.reader.PylibCZIReader
    • wsidata.reader.SpatialDataImage2DReader
  • API Reference
  • Torch Datasets

Torch Datasets#

TileImagesDataset

Dataset for tiles from the whole slide image.

TileFeatureDataset

Dataset for features extracted from tiles.

graph_data

Create a PyTorch Geometric Data object from the graph data in WSIData.

Dataset builder#

FeaturesDatasetBuilder

Build train and test dataset from multiple slides.

On this page
  • Torch Datasets
  • Dataset builder
Show Source

© Copyright 2026, Rendeiro Lab.

Created using Sphinx 9.1.0.

Built with the PyData Sphinx Theme 0.17.1.